AS1/MMP25 interaction reduces neutrophil infiltration and intestinal epithelial injury in HIV/SIV infection
JCI Insight | Lakmini S. Premadasa | Eunhee Lee | Marina McDew-White | Xavier Alvarez | Sahana Jayakumar | Binhua Ling | Chioma M. Okeoma | Siddappa N. Byrareddy | Smita Kulkarni
To determine the role of lncRNAs in HIV/SIV-induced intestinal epithelial dysfunction, we profiled and identified differentially expressed (DE) lncRNAs based on a log2 fold-change (FC) cutoff of >2.0 for upregulated lncRNAs and FC < –2.0 for downregulated lncRNAs with P < 0.05. Image quantification (HALO) confirmed significantly elevated MMP25 protein expression in the CE of VEH/SIV compared with both THC/SIV (P < 0.0001) and uninfected control RMs (~2.0-fold) (P < 0.0001) (Figure 3C). MMP25-AS1 overexpression significantly reduces MMP25 mRNA and protein expression in in vitro–cultured primary colon and small intestinal epithelial cells. Further, relative to VEH/SIV/cART RMs, expression of MMP25-AS1 was significantly higher in JE of THC/SIV/cART RMs, and this increase was also associated with significantly reduced MMP25 mRNA expression (P < 0.0001) (Figure 7B). In contrast to the findings in the colon of cART-naive SIV-infected RMs (Figure 6, A and C), no significant difference in the number of MPO/CD11b++ neutrophils was detected in the jejunal lamina propria of VEH/SIV/cART compared with THC/SIV/cART RMs despite significantly high MMP25 protein expression.
Tags:
- Gene expression
- Long non-coding RNA
- Protein isoform
- Interferon gamma
- Transcription (biology)
- Base pair
- Inflammation
- Transfection
- Formyl peptide receptor 2
- Messenger RNA
- Epigenetics
- Complementarity (molecular biology)
- Protein
- Neutrophil
- HIV
- Inflammatory bowel disease
- Vector (molecular biology)
- Antisense RNA
- Intestinal epithelium
- Alpha-1 antitrypsin
- Downregulation and upregulation
- Immunostaining
- Simian immunodeficiency virus
- Regulation of gene expression
- Exon
- CD47
- Real-time polymerase chain reaction
- Sense (molecular biology)
- Three prime untranslated region
- Health sciences
- Genetics
- Life sciences
- Cell biology
- Biology
- Biotechnology
- Molecular biology
- Biochemistry